Metagenome

PTP is leading data production and data analysis for large-scale metagenomics projects, contributing to the development of an ever-expanding collection of new approaches and methodologies.
Metagenome analysis requires a multi-disciplinary approach which includes: high quality sequence generation, advanced solutions for assembly and data mining.

  • Metabarcoding Sequencing: investigation of microbial communities in a variety of sample types (e.g. soil, water, feed, gut flora, rumen) by amplicon sequencing using hypervariable genomic regions such as 16S , 18S, ITS.

  • Metagenomics Sequencing: custom library preparation, whole¬†metagenome or metatranscriptome shotgun sequencing.

 

BIOINFORMATICS PLUGIN

 

Metabarcoding analysis: primary data quality control, sequence clustering, taxonomic assignment and differential frequency analysis of the microbial species identified.

 

ADVANCED SERVICE

Metagenomics analysis: metagenome assembly, taxonomic assignment, ORF prediction and annotation.

 

Get a quote for our metagenome services